PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MA_126261g0010
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family bHLH
Protein Properties Length: 362aa    MW: 42185.6 Da    PI: 6.3576
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MA_126261g0010genomeConGenIEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH23.69.6e-08182226554
                     HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH   5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                     h  +Er+RR ++++ f+ L +llP++      K +K ++L    +Y+++L
  MA_126261g0010 182 HMLAERNRRIKLKQHFSLLHSLLPNN-----SKRDKYSVLSDIRKYMSEL 226
                     7789*********************8.....699*******999999988 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088812.487177226IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474593.14E-13180246IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.59E-7181230No hitNo description
Gene3DG3DSA:4.10.280.108.5E-11181245IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.6E-5182226IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003536.9E-8183232IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 362 aa     Download sequence    Send to blast
MDSKYTNPIM EIKAASVSEG DFNGIPWDYT TTSSSGMMIQ ANGQNAGNRN MNADSMCIID  60
DAYFEPPLYM STTETSWYSS SSEDMERFYQ LDHCNIYHPQ SINAADNSMS MPQSTLTLYR  120
QSAFVSYLRP AHSLCVNTGR QDLLKRSFNF LREIYEKRRE AANIPEAHEF DVSLQNKAAF  180
HHMLAERNRR IKLKQHFSLL HSLLPNNSKR DKYSVLSDIR KYMSELKRQV DELEQRNRAL  240
KESLRRNISN KERCSSLDLR HDENLTKIVY SSDEVVLRQS ENIPNQLDIR INVQIDPLSS  300
PNNLVIFLLE RLRELQLEVV SVEYSIQTFK FQAHLLIKQI EGEEWESSKW ENLAEVLRCT  360
FI
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP1163137
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G56960.19e-11bHLH family protein